Spatial Transcriptomics

Spatial Transcriptomics

Spatial gene expression inference from histology using feature-level fusion of pathology foundation models

We present a method for inferring spatial gene expression from histology images using feature-level fusion of pathology foundation models.

h.-rafique
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MOSAIK: Multi-Origin Spatial Transcriptomics Analysis and Integration Kit featured image
Spatial Transcriptomics

MOSAIK: Multi-Origin Spatial Transcriptomics Analysis and Integration Kit

📖 _Journal of Open Source Software_ · 2026 — Open-source toolkit for integrating spatial transcriptomics data from Xenium, CosMx and MERFISH into a standardised SpatialData …

anthony-baptista
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SMART: A Spatio-Molecular Atlas of Response Trajectories in Triple-Negative Breast Cancer featured image
Breast Cancer

SMART: A Spatio-Molecular Atlas of Response Trajectories in Triple-Negative Breast Cancer

📖 _Nature Cancer (under review)_ · 2025 — A spatio-molecular atlas characterising response trajectories in triple-negative breast cancer using spatial transcriptomics and …

i.-wall
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